Cti-MIRN590

Basic info.

• miRNA locus ID
• Cti-MIRN590

• miRNA locus accession
• PmiREN003485

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01063088.1  1667  1796  +

• Comments
• A member of family MIRN590

• Confidence level
• 

Secondary strurture and sequence

  TGTACGTCCTTCCCTCATCC   T C   -   G    -----------      CACAT    A  C TGT
                      GTG C ATG CGA GACT           AGGCCT     AGTC TC G   
                      ||| | ||| ||| ||||           ||||||     |||| || |   A
                      TAC G TAC GCT CTGA           TCCGGA     TCAG AG C   
CTACTACTACTACCACTGCCAC   T C   T   A    TATNGATACAC      -----    G  C TAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]