Cti-MIRN589

Basic info.

• miRNA locus ID
• Cti-MIRN589

• miRNA locus accession
• PmiREN003477

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01125924.1  3176  3358  +

• Comments
• A member of family MIRN589

• Confidence level
• 

Secondary strurture and sequence

  TCAAAGAGAAATTATATATC      AT        A   T                 A    TAAT            --  GG  GGAA
                      CTCCTA  TTTTATGC TAC CATCCTCCTACTCATAT AGAA    ACACTTGTCACA  TG  CA    
                      ||||||  |||||||| ||| ||||||||||||||||| ||||    ||||||||||||  ||  ||    A
                      GAGGAT  AAAATACG ATG GTAGGAGGATGAGTATA TTTT    TGTGAACAGTGT  AC  GT    
ACTTTATCTCTTTAATATAAAG      GT        G   C                 C    CCTC            TT  TA  AGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]