Cti-MIRN588

Basic info.

• miRNA locus ID
• Cti-MIRN588

• miRNA locus accession
• PmiREN003476

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01285980.1  29825  29961  +

• Comments
• A member of family MIRN588

• Confidence level
• 

Secondary strurture and sequence

  AGAGAAATAACAAATAAACA      AGA   -       TG    TTT     -        -   TTGT
                      TTTAAT   AGC TGTATTT  GTAC   GCTTA CATACTTA CCT    
                      ||||||   ||| |||||||  ||||   ||||| |||||||| |||     
                      AGATTA   TCG ACATGGA  CGTG   TGAGT GTGTGGGT GGA    
CACTAAGCGTATGGAATCGCGG      -GA   C       CA    ---     C        T   CCAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]