Cti-MIR319d

Basic info.

• miRNA locus ID
• Cti-MIR319d

• miRNA locus accession
• PmiREN003474

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01257360.1  1451  1661  +

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

  ATGGTAGAAATAAAATTAAG                  CT      C   T       AC     C -  G   AC        T  AA        --A   GAG
                      GGAGCTTCCTTCAGTCCA  CATAGG GGG AGAGGGT  GGATT G CT CCG  TCATTCAT CA  CACAATAG   GAT   
                      ||||||||||||||||||  |||||| ||| |||||||  ||||| | || |||  |||||||| ||  ||||||||   |||   G
                      CCTCGAGGGAAGTCAGGT  GTGTCT TTC TTTCCTA  TTTAA C GA GGC  AGTAAGTG GT  GTGTTATC   TTA   
AACACCTTCTACCTATTGATTC                  TC      T   T       -A     A A  G   GT        T  AA        GGG   GAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]