Single miRNA

Cti-MIRN586

Basic info.

miRNA locus ID
Cti-MIRN586

miRNA locus accession
PmiREN003469

Organism
Carthamus tinctorius

Genomic location
Cti-LUCG01255555.1 8197 8316 -

Comments
A member of family MIRN586

Confidence level

Secondary strurture and sequence

mature sequence star sequence

5'

3'

  CTTTGCAACA                                      - C    ATAA
            AATTACAAGATTTCTGTTGATTAGATCCATAAGGTAAG C TTTA    
            |||||||||||||||||||||||||||||||||||||| | ||||    A
            TTAATGTTCTAAAGACAACTAATCTAGGTATTCCATTC G AGAT    
TTCCATGACGAC                                      T T    CCCT

Get mature sequence
Get star sequence
Get miRNA stem-loop seqence
Get miRNA stem-loop ± 20bp
Get dot-bracket miRNA secondary structure

miRNA cluster info.

Cluster ID:
Chromosome:
Cluster start:
Cluster end:

No miRNA locus in ± 10k bp interval.

Expression info.

Reads per million (RPM)

Mature miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

No target gene.