Cti-MIRN576b

Basic info.

• miRNA locus ID
• Cti-MIRN576b

• miRNA locus accession
• PmiREN003462

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01100775.1  2714  2962  -

• Comments
• A member of family MIRN576

• Confidence level
• 

Secondary strurture and sequence

        TCAAA    TAA  TTTC      A   A   -A  -TA      -     TCATTCAAACACATAAACTCTTACAAACTCCATTCTCATTCAAACATGAAGAATATGAGAATCCATCCTGG
             CACA   CC    TATCTC TTC AAC  CA   ACCTTT CTATC                                                                       
             ||||   ||    |||||| ||| |||  ||   |||||| |||||                                                                       T
             GTGT   GG    GTGGAG AAG TTG  GT   TGGAGA GCCCC                                                                       
GGACTAAAAAAAG    TAG  TCCA      -   A   CA  TCG      A     AAGGGAGGGGGCATTTTGTACCATATGCGGTATACTGGTCAGAGGTTTTTGTTGTTGAGTAACAACTTGCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]