Cti-MIRN573c

Basic info.

• miRNA locus ID
• Cti-MIRN573c

• miRNA locus accession
• PmiREN003458

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01205039.1  190  331  -

• Comments
• A member of family MIRN573

• Confidence level
• 

Secondary strurture and sequence

 ACTCAA   -C        T   A    C  -C   A         C           ----------T      CA
       AGA  GCCACGTG CGC CTCT GG  TGT CTCACGTTC CAACCAAAAAG           GGTTCA  
       |||  |||||||| ||| |||| ||  ||| ||||||||| |||||||||||           ||||||   
       TCT  CGGTGCAC GCG GAGA CC  ACA GAGTGCAAG GTTGGTTTTTC           TCAAGT  
TTTTAAG   TA        C   C    -  TA   G         T           NATATCTCCTT      TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]