Cti-MIRN579

Basic info.

• miRNA locus ID
• Cti-MIRN579

• miRNA locus accession
• PmiREN003455

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01182220.1  821  949  +

• Comments
• A member of family MIRN579

• Confidence level
• 

Secondary strurture and sequence

      CT   A  TT   -  AACT     TC      T     -TT       CAATTCCAAAACTGCT
        CCA GT  GTC TC    TCCAT  TCTGTT ATGTT   TCCAAAG                
        ||| ||  ||| ||    |||||  |||||| |||||   |||||||                T
        GGT TA  CAG AG    GGGTA  AGATAG TACAG   GGGTGGC                
TGGAGACC   A  -T   T  ----     TA      -     CTC       TACAGGCCTTCGTTGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]