Cti-MIRN576a

Basic info.

• miRNA locus ID
• Cti-MIRN576a

• miRNA locus accession
• PmiREN003451

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01080266.1  918  1140  +

• Comments
• A member of family MIRN576

• Confidence level
• 

Secondary strurture and sequence

  CTTTCAAA    TAA  TTTC      A   A   -   TAAAC     CAAACTT ATTCTCACTCAAACATGGAGAATATGAGAATCCATCCTTGTCCGTTCAACAATGAGTTG
          CACA   CC    TATCTC TTC AAC TCA     TCTCA       T                                                           
          ||||   ||    |||||| ||| ||| |||     |||||       |                                                           C
          GTGT   GG    GTGGAG AAG TTG AGT     CTTGG       G                                                           
CTAAAAAAAG    TAG  TCCA      -   A   C   ----T     ------A GAGCCCCAAGGGAACCGGCACTTTGTTCCATATTCGGGATACAAGTCAGAGGCTTTTGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]