Cti-MIRN574

Basic info.

• miRNA locus ID
• Cti-MIRN574

• miRNA locus accession
• PmiREN003446

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01108316.1  2049  2209  -

• Comments
• A member of family MIRN574

• Confidence level
• 

Secondary strurture and sequence

  TTC      T   T          A  C   A        A     ----AT   ATGTTCACTCTAGCCGGGTCTATTTCC
     TGATCT GTA TGGTGAAAGG AT ATG ACGTGAGG TGGTC      CGG                           
     |||||| ||| |||||||||| || ||| |||||||| |||||      |||                            
     ATTAGA CGT ATCACTTTCC TG TAC TGCACTTC ATCAG      CCG                           
CTTGT      C   C          C  T   C        -     CACCAG   GAGAATAGAACACGTTTTTTATGTGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]