Cti-MIRN573a

Basic info.

• miRNA locus ID
• Cti-MIRN573a

• miRNA locus accession
• PmiREN003445

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01102138.1  339  602  +

• Comments
• A member of family MIRN573

• Confidence level
• 

Secondary strurture and sequence

AACCAATTTTTGGTTG              A           C       CAA       TTTTTTCGACT   -       -  TACTGAATAACGCTATCATTCAGANCTCTGATGCCTCCGATGCGCGCGGGTTAG
                TGAACGTGAGGACA TCCAGAGCGCG TACGTGG   TCTGAAT           TAG TGTTATT CA                                                      
                |||||||||||||| ||||||||||| |||||||   |||||||           ||| ||||||| ||                                                       
                ACTTGCACTCCTGT GGGTCTCGCGC GTGCACC   AGACTTA           TTG GCGCCCA TC                                                      
                              C           T       TNC       ----------T   A       A  ACAATAAGTATGACTTATTTCGCAATAAGTCATACTTATTGTGAACTGGGCGCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]