Cti-MIRN569

Basic info.

• miRNA locus ID
• Cti-MIRN569

• miRNA locus accession
• PmiREN003441

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01034964.1  2518  2688  +

• Comments
• A member of family MIRN569

• Confidence level
• 

Secondary strurture and sequence

  ATTATCTGATATAGCTCCC      -C    CG       -T  TG    -- TCTTTTGTTGGTACATACGGCTATGTTGCTCCAGA
                     TTGAAT  TACC  ACCCTAA  GT  GTAC  C                                   
                     ||||||  ||||  |||||||  ||  ||||  |                                   A
                     AGCTTG  ATGG  TGGGGTT  CT  TATA  C                                   
TGATCAGAGGGTGTGTTCTAA      TT    --       TA  --    TG AGACTAAAACGCGAACGTCAAGGTCAGAACTTTAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]