Cti-MIRN568

Basic info.

• miRNA locus ID
• Cti-MIRN568

• miRNA locus accession
• PmiREN003439

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01022602.1  491  696  +

• Comments
• A member of family MIRN568

• Confidence level
• 

Secondary strurture and sequence

CAGATCCAACGGAG CG     ------------        A  TCA   GA       ----    ---------    A GAACCAC   GTCGGGGGTTCAAATCCTTCCTCACCCACAAGCA
              A  GAGTG            GGGCCTGT GC   GAG  ATAGAGC    ACGT         GGCT C       GGT                                  
              |  |||||            |||||||| ||   |||  |||||||    ||||         |||| |       |||                                  G
              T  CTCAT            TCTGGGCA CG   CTC  TATTTCG    TGCA         ACAT A       TAT                                  
               TG     TACGTATGCAAT        A  -TG   -A       ATAA    ACCAAAGAC    - -------   AGTATATATGTTTAATTCCAGGAAGGGAAAACCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]