Cti-MIRN520e

Basic info.

• miRNA locus ID
• Cti-MIRN520e

• miRNA locus accession
• PmiREN003438

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01005872.1  1874  2028  +

• Comments
• A member of family MIRN520

• Confidence level
• 

Secondary strurture and sequence

      C   TCTA  C        G         C  AT             ---------     ----------AAC     CA
GGAACA CCT    GC CTTCATCT GAGGGTATG AC  GTGCATACAAGTA         ATTGT             ATGCA  
|||||| |||    || |||||||| ||||||||| ||  |||||||||||||         |||||             |||||   
CCTTGT GGA    CG GAAGTAGA TTTCCATAC TG  CACGTATGTTCAT         TAACA             TACGT  
      A   TCAC  A        G         T  AT             TTAATTCAA     AAAAAACCAAAAA     GC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]