Cti-MIRN520d

Basic info.

• miRNA locus ID
• Cti-MIRN520d

• miRNA locus accession
• PmiREN003437

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01005419.1  2775  2925  -

• Comments
• A member of family MIRN520

• Confidence level
• 

Secondary strurture and sequence

      C  GT   CAACC             G                  C    A  T   GT   TTTT  -  TT
    AA AC  TGA     GTTCATCTGGACG TATGCACATGTGTATACA GTAA TT TAA  TGT    TG GT  
    || ||  |||     ||||||||||||| |||||||||||||||||| |||| || |||  |||    || ||  T
    TT TG  ACT     CAAGTAGGCCTGT ATACGTGTACACGTATGT CATT AA ATT  ACG    GC CG  
TACT  T  --   TATTA             A                  T    A  T   GT   -TGT  A  TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]