Cti-MIRN526b

Basic info.

• miRNA locus ID
• Cti-MIRN526b

• miRNA locus accession
• PmiREN003436

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01000386.1  3358  3558  +

• Comments
• A member of family MIRN526

• Confidence level
• 

Secondary strurture and sequence

TT   AA          T AA           G  T           A   A ACATCTTTGGTTACGGTGGACGTGATCACGGAGGATTGATGCAGAGGGTA
  CAT  GAGAAGCATA C  TTTAAGAGAAC TG GGACAAATCTC GCA C                                                  
  |||  |||||||||| |  ||||||||||| || ||||||||||| ||| |                                                   
  GTA  CTCTTTGTAT G  AAATTCTCTTG AC CTTGTTTAGAG CTG G                                                  
     CG          T AA           -  T           -   - TGAGTAGTCCAGTTATTTCCGACGAAACTGGCCAGGGGGGATTATTAGAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]