Cti-MIRN17

Basic info.

• miRNA locus ID
• Cti-MIRN17

• miRNA locus accession
• PmiREN003433

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01444647.1  157  274  -

• Comments
• A member of family MIRN17

• Confidence level
• 

Secondary strurture and sequence

  CGTGAA         CTA            GG         -   -   -AGAG   TGG
        ACATGATTG   GTGGTGCAATGG  GACGCCGAG TTA GCC     TGG   
        |||||||||   ||||||||||||  ||||||||| ||| |||     |||    
        TGTATTGAC   CACCACGTTACT  CTGCGGCTC AAT CGG     ACC   
TTTTTCTC         AAC            -G         C   A   GTGGA   CTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]