Cti-MIRN559a

Basic info.

• miRNA locus ID
• Cti-MIRN559a

• miRNA locus accession
• PmiREN003421

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01181447.1  9564  9646  +

• Comments
• A member of family MIRN559

• Confidence level
• 

Secondary strurture and sequence

CCCGAATGGGGCA    A    -   A      T  AA   GTA
             GCCT CCGG TTT GGCTTG GG  GGT   
             |||| |||| ||| |||||| ||  |||    
             TGGG GGCC AAG TTGAAC CC  CCA   
  AAAGGTAGGGA    -    T   C      -  AA   ACA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]