Cti-MIRN557

Basic info.

• miRNA locus ID
• Cti-MIRN557

• miRNA locus accession
• PmiREN003419

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01163286.1  1  235  +

• Comments
• A member of family MIRN557

• Confidence level
• 

Secondary strurture and sequence

               GAAC     A  A       ---TC     C    G GATGGAATACGACTGTGGCTCGGTATACTGTGGGATGGAACCCATCATATCGGTCGGCTGCTGCTGGGTGTATCCCT
                   GGTGT CG GTGATGC     GGTGA CGGT G                                                                             
                   ||||| || |||||||     ||||| |||| |                                                                             G
                   CTACA GC CGCTATG     CCACT CGTT G                                                                             
TTAAACTATAAACATACGT     -  -       TTTCA     -    - GACAACGACGTCAACGAAGGACCCAATCATCATAAAAACCTCTTAGCTGGTCGTCGCCGGGGGTACTCTGCTGTAAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]