Cti-MIRN552

Basic info.

• miRNA locus ID
• Cti-MIRN552

• miRNA locus accession
• PmiREN003413

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01063142.1  1591  1714  -

• Comments
• A member of family MIRN552

• Confidence level
• 

Secondary strurture and sequence

  TAA     -  CC    A   A      T              CG     -T     TTTGC
     TACGA TG  GGCG TTC TAAAGC CAGAAAGACATCGT  GTCGG  AAGGA     
     ||||| ||  |||| ||| |||||| ||||||||||||||  |||||  |||||     T
     ATGCT AC  CCGC AAG ATTTCG GTCTTTCTGTGGCA  CGGCC  TTTCT     
AACTA     C  AT    G   -      C              CG     CT     TTTCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]