Cti-MIRN548

Basic info.

• miRNA locus ID
• Cti-MIRN548

• miRNA locus accession
• PmiREN003408

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01457411.1  156  270  -

• Comments
• A member of family MIRN548

• Confidence level
• 

Secondary strurture and sequence

  GCTGC                     C  A           GA      CACATGG
       AAACTCAAGTCTGATTGCGAA GC AGGACAGCCGA  GTGCGC       
       ||||||||||||||||||||| || |||||||||||  ||||||       C
       TTTGAGTTTGGGCTAACGCTT TG TCCTGTCGGCT  CACGCG       
GTTTACC                     C  C           AC      ATTTATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]