Cti-MIRN516b

Basic info.

• miRNA locus ID
• Cti-MIRN516b

• miRNA locus accession
• PmiREN003407

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01387700.1  14  120  -

• Comments
• A member of family MIRN516

• Confidence level
• 

Secondary strurture and sequence

  CTCGGGGTGTGGACTGGTGCG               CAAAG  -     TGTT
                       GATTGGTGCGGCGGC     CC TGGGC    
                       |||||||||||||||     || |||||    G
                       CTAGCTGCGCTGCCG     GG GTCCG    
ATTGCCGCGTGCGACGGTTGGTG               -TAGA  T     TATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]