Cti-MIRN544

Basic info.

• miRNA locus ID
• Cti-MIRN544

• miRNA locus accession
• PmiREN003401

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01258404.1  507  741  -

• Comments
• A member of family MIRN544

• Confidence level
• 

Secondary strurture and sequence

             TA        CTC                              CCC    AACTAAAAACCCTCTAACTCATCTCTCCATCATTAACCCCTACAAACCCTCAACCGATC
    ACAACTCTA  AGGTGCTC   TGAGGATAGATGATCAAGAAGATCATCTAA   TAGA                                                           
    |||||||||  ||||||||   ||||||||||||||||||||||||||||||   ||||                                                            
    TGTTGAGAT  TTCACGAG   ACTCCTATCTACTAGTTCTTCTAGTAGATT   AGGT                                                           
GGAT         --        ATA                              ---    AGTTTACCAAGAAGTGTACGTAATGTCATACAACCATTTAGAAGTAATAAAGCAAGGTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]