Cti-MIRN540b

Basic info.

• miRNA locus ID
• Cti-MIRN540b

• miRNA locus accession
• PmiREN003398

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01257159.1  591  681  +

• Comments
• A member of family MIRN540

• Confidence level
• 

Secondary strurture and sequence

AA                 A              G C       TA
  TAATCATGTATTATGCA ACTGCATAACACAG A TCGGTAT  
  ||||||||||||||||| |||||||||||||| | |||||||  T
  ATTAGTACATAATACGT TGACGTATTGTGTT T AGTCATA  
                   A              G A       CG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]