Cti-MIRN541

Basic info.

• miRNA locus ID
• Cti-MIRN541

• miRNA locus accession
• PmiREN003396

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01231183.1  604  817  -

• Comments
• A member of family MIRN541

• Confidence level
• 

Secondary strurture and sequence

   T C          T AA             AC            T             A  ---   GACGTGATCACGGAGGATTGATTGACGCTATTCATGGGAG
  A G GAGAAGCATA C  TTTAAGAGAACGT  GAAGCAATCTCA TCACTCATCTTCT CT   GTG                                        
  | | |||||||||| |  |||||||||||||  |||||||||||| ||||||||||||| ||   |||                                         
  T T CTCTTTGTAT G  AAATTCTCTTGCA  CTTCGTTAGAGT GGTGAGTAGGCCA GT   TTC                                        
AG T A          T AA             CT            C             -  TAT   CGCAGAGACTGGCCAGGGGAGGGGAATTTATTAGAGATGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]