Cti-MIRN537

Basic info.

• miRNA locus ID
• Cti-MIRN537

• miRNA locus accession
• PmiREN003392

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01156189.1  1385  1580  -

• Comments
• A member of family MIRN537

• Confidence level
• 

Secondary strurture and sequence

  CCAC               A           C           C      - CT   ----   GT  TCCCCCCCCCCTTTAATTCAATGCCCACCCATG
      TTTTTGGTTGTGAAC TGAGGACAGCT AGAGCGCGACA GTGGCG T  TTG    AGT  GG                                 
      ||||||||||||||| ||||||||||| ||||||||||| |||||| |  |||    |||  ||                                 A
      AAAAACCAACACTTG ACTCCTGTTGG TCTCGCGCTGT CACCGG T  ACT    CGT  GG                                 
TTGGTA               C           C           T      C --   GATC   --  TGCAGTCCAGGTGGCGCCTACTGATCCGCGCTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]