Cti-MIRN535

Basic info.

• miRNA locus ID
• Cti-MIRN535

• miRNA locus accession
• PmiREN003390

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01127668.1  8608  8810  +

• Comments
• A member of family MIRN535

• Confidence level
• 

Secondary strurture and sequence

TT                              A                                        G       C     --------       GTTT
  CGTAGCCTATTTTACGTGTATCAACCGGCT GAAATTACTTTAAATTGGGTTTAATTCGAGGAATGAAATA GAAACTT GAATA        AAATTGG    
  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||        |||||||    A
  GCATCGGATAAAATGCGCATAGTTGGCCGA CTTTAATGAAATTTAACCTAAATTAAGCTCCTTACTTTAT CTTTGAA CTTAT        TTTAACC    
                                C                                        A       A     GTAGTTGG       GTTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]