Cti-MIRN525

Basic info.

• miRNA locus ID
• Cti-MIRN525

• miRNA locus accession
• PmiREN003378

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01298258.1  31  227  -

• Comments
• A member of family MIRN525

• Confidence level
• 

Secondary strurture and sequence

  CCAAAAACGT   C  T           CA              CTGCAA     GTCTT          ACC  CAC   -       T      C ATCAT
            TGC TT GCCTGCATTTG  CCTGCACCTTTCTT      TCTTC     CCTTTTCACC   AC   CAC CATGGGC GTGTTG C     
            ||| || |||||||||||  ||||||||||||||      |||||     ||||||||||   ||   ||| ||||||| |||||| |      
            ACG AA TGGACGTGAAC  GGACGTGGGAAGAA      AGAAG     GGAGAGGTGG   TG   GTG GTGTTTG TATAAC G     
ACCTATTTTCTA   T  T           -A              -----A     -AATT          --A  AAT   T       -      A AATAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]