Cti-MIRN522

Basic info.

• miRNA locus ID
• Cti-MIRN522

• miRNA locus accession
• PmiREN003374

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01291702.1  1519  1657  -

• Comments
• A member of family MIRN522

• Confidence level
• 

Secondary strurture and sequence

      AA   C   T       C           -    A         --T  TC         T     GA
    AT  AGT TGA GGAGATG TGGAATCGGTG CTTC GAAGAAGAA   GA  GATTAGCCG CAATA  
    ||  ||| ||| ||||||| ||||||||||| |||| |||||||||   ||  ||||||||| |||||   
    TA  TCA GCT CCTCTGT ACTTTAGCCAC GGAG CTTTTTTTT   TT  TTAGTTGGC GTTAT  
CCTC  --   A   C       A           C    C         TGT  TC         T     TG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]