Cti-MIRN519

Basic info.

• miRNA locus ID
• Cti-MIRN519

• miRNA locus accession
• PmiREN003370

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01276506.1  3227  3407  -

• Comments
• A member of family MIRN519

• Confidence level
• 

Secondary strurture and sequence

ACAAGGATGAACT    T   --          A  A         -------     G C    GGTAGTAAGTCAATGGAGAATTTAGGTCGTG
             AGTC TGT  TGTGGATGGC GA GGGTTTTTG       CACGA T AAAT                               
             |||| |||  |||||||||| || |||||||||       ||||| | ||||                               A
             TCAG ACG  ACATTTATCG CT CTTAAGAAT       TTACG A CTTT                               
TTAAGTAAATAGT    C   TA          -  A         AATGAAT     - -    TTTGCTGGAACTAGCATCGAGAAGTTTTGTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]