Cti-MIRN515

Basic info.

• miRNA locus ID
• Cti-MIRN515

• miRNA locus accession
• PmiREN003366

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01023062.1  1892  2014  +

• Comments
• A member of family MIRN515

• Confidence level
• 

Secondary strurture and sequence

 TGGGA   A     -            A    -   T       T   T      -TT  AAA
      AAC CCAAT GTATATTTTGAG CGTT GCT CCATGTG GAC AGCAAA   CG   
      ||| ||||| |||||||||||| |||| ||| ||||||| ||| ||||||   ||    
      TTG GGTTA CGTATAAAACTC GCAA CGG GGTGCAC CTG TCGTTT   GC   
TAGCTG   A     T            G    T   -       T   C      TCT  AAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]