Cti-MIR530

Basic info.

• miRNA locus ID
• Cti-MIR530

• miRNA locus accession
• PmiREN003361

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01241135.1  530  693  +

• Comments
• A member of family MIR530

• Confidence level
• 

Secondary strurture and sequence

     AA    G     AGTTTTTA      TT    C           -   ---   ATGTTGCTCACACACTTGGCTTCATTTCTCTT
       GGCG TTTTG        TCTGCA  TGCA CTGCACCTCTA CTC   GCT                                
       |||| |||||        ||||||  |||| ||||||||||| |||   |||                                 
       CCGT AAAAC        AGACGT  ATGT GACGTGGAGAT GAG   GGG                                
CCTTCTA    -     --------      CT    A           T   TTT   TCTCTTCTCTTCTCTTCTCTTCTCTTCTCCTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]