Cti-MIR399c

Basic info.

• miRNA locus ID
• Cti-MIR399c

• miRNA locus accession
• PmiREN003358

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01304411.1  8031  8131  -

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

 AAAC   -      C   A        T A      C      T     AC
     GTA TAAGTG ATT CTGGGTAA T CTCCTT GGCAGT GGGGC  
     ||| |||||| ||| |||||||| | |||||| |||||| |||||   
     CAT GTTTAC TAA GACCCGTT A GAGGGA CCGTCA CCTCG  
AATAA   C      T   C        T -      A      C     CT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]