Cti-MIR390b

Basic info.

• miRNA locus ID
• Cti-MIR390b

• miRNA locus accession
• PmiREN003340

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01426686.1  116  256  -

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

  ATG       AT  T      A        G           ---------------------      AA     TTAC
     GTAGAGA  AA CTGTAA GCTCAGGA GGATAGCGCCT                     ACGTAT  ATACA    
     |||||||  || |||||| |||||||| |||||||||||                     ||||||  |||||     
     CATCTTT  TT GGCATT CGAGTTCT CCTATCGCGGA                     TGCATA  TGTGT    
TACCT       CT  C      C        A           AGCCAAACTATAATAGACGTA      CA     TCTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]