Cti-MIR390a

Basic info.

• miRNA locus ID
• Cti-MIR390a

• miRNA locus accession
• PmiREN003339

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01298544.1  589  718  -

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

   AC       G    T    AAA        G            --CT    -ACATA       A
     AGTACGA AGAA CTGT   GCTCAGGA GGATAGCGCCAT    ATAT      TACATAT 
     ||||||| |||| ||||   |||||||| ||||||||||||    ||||      ||||||| A
     TCGTGCT TCTT GGCA   CGAGTCCT CCTATCGCGGTG    TGTA      ATGTATA 
ATACA       -    C    CTC        A            CTTT    ATATAC       T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]