Cti-MIR319c

Basic info.

• miRNA locus ID
• Cti-MIR319c

• miRNA locus accession
• PmiREN003338

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01454010.1  1004  1127  -

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

  TGTGATGAAGGAATT      G  G   AC            C  TTC     --A   GGAT
                 GAATTA CT CCG  TCATTCATTTAA CA   AGTAG   AAA    
                 |||||| || |||  |||||||||||| ||   |||||   |||     
                 TTTGAT GA GGC  AGTAAGTGAGTT GT   TCATC   TTT    
TCTAACCTTTCCCTACT      A  G   GT            A  --T     GTA   AGCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]