Cti-MIR319b

Basic info.

• miRNA locus ID
• Cti-MIR319b

• miRNA locus accession
• PmiREN003337

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01300110.1  2771  2980  -

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

 AGC   -CAA     -  TT  A                 CT          TAG     GT       -  G  G  -        T  AA       ACA   TTAT
    TGG    ATAGC AC  AG GAGCTTTCTTTAGTCCA  CATAGGTAGG   AGGGT  GGATTTG CT CT GC TCATTCAT CA  CACAATA   TCA    
    |||    ||||| ||  || |||||||||||||||||  ||||||||||   |||||  ||||||| || || || |||||||| ||  |||||||   |||     
    ACC    TATTG TG  TC CTCGAGGGAAGTCAGGT  GTATTTATCT   TCCTA  TCTAAAC GA GG TG AGTAAGTG GT  GTGTTAT   AGT    
AAGA   AATA     C  -T  C                 TC          -TA     -G       A  -  G  T        T  CA       -CA   CTGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]