Cti-MIR172g

Basic info.

• miRNA locus ID
• Cti-MIR172g

• miRNA locus accession
• PmiREN003335

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01461380.1  1412  1542  -

• Comments
• A member of family MIR172

• Confidence level
• 

Secondary strurture and sequence

 A  T   -    T  A                       A     AATG   ------          TG
  AC GTC ATTG TT CTGGTGCGGCATCATCAAGATTC TATTT    CCC      TATATATATA  
  || ||| |||| || ||||||||||||||||||||||| |||||    |||      ||||||||||  T
  TG CAG TAAC AA GACTACGTCGTAGTAGTTCTAAG GTAAG    GGG      ATATATATGT  
AG  T   A    T  A                       A     ----   TTTTCT          TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]