Cti-MIR172d

Basic info.

• miRNA locus ID
• Cti-MIR172d

• miRNA locus accession
• PmiREN003332

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01181992.1  1715  1894  +

• Comments
• A member of family MIR172

• Confidence level
• 

Secondary strurture and sequence

 GATT    -   C  A             T         A    ACTG     ---     T   AA           -------------C  T   GA
     GTCG TTG TT CTGGTGCGGCATC TCAAGATTC CATT    CCTAA   TTAAT GTT  CTTTTGGGAGC              GC GGC  
     |||| ||| || ||||||||||||| ||||||||| ||||    |||||   ||||| |||  |||||||||||              || |||  G
     TAGT AAC AA GACTACGTCGTAG AGTTCTAAG GTAA    GGGTT   AATTG TAA  GAAAACCTTTG              TG CCG  
CTTTT    T   T  A             T         A    ---A     TTC     T   --           CCTTTTAGATAATT  C   TC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]