Cti-MIR171a

Basic info.

• miRNA locus ID
• Cti-MIR171a

• miRNA locus accession
• PmiREN003323

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01013443.1  5014  5132  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   TGTAAAT    AAG G          A               C   T T   A  AAG
          GGTA   T ATGATATTGG ATGGCTCAATCAAAT AAA C CCC GA   
          ||||   | |||||||||| ||||||||||||||| ||| | ||| ||   A
          TCAT   A TACTATAACC TGCCGAGTTAGTTTA TTT G GGG CT   
AACTTATTCG    -CA G          G               A   T T   A  ACA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]