Cti-MIR169r

Basic info.

• miRNA locus ID
• Cti-MIR169r

• miRNA locus accession
• PmiREN003322

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01457271.1  73  209  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  AAGGC               GAA   AA           -CAC TC      ACA      A   TAGG
       AAAGGGTCTTTCGTG   GCC  GGATGACTTGC    C  CAATCT   GGGTTT TAT    
       |||||||||||||||   |||  |||||||||||    |  ||||||   |||||| |||     
       TTTCTTGGAAAGTAT   CGG  TCTGTTGAACG    G  GTTAGG   CCTAAA ATG    
ATTCTCA               ATC   CG           TAAT TA      --C      A   TACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]