Cti-MIR169j

Basic info.

• miRNA locus ID
• Cti-MIR169j

• miRNA locus accession
• PmiREN003314

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01099248.1  1430  1562  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

     TAGGAA       AAAACAA     G   A  GAA    -AT    -      GAAGAGGGG   TTA
           GTTTATG       GTAAG CAT CC   GCTG   AGCA GAGTAT         TTC   
           |||||||       ||||| ||| ||   ||||   |||| ||||||         |||    
           CAAGTGT       CGTTC GTA GG   CGAT   TTGT CTCATG         AAG   
GTTGAACTACA       ---GCTC     A   -  AAC    GAT    T      --AGAAGAG   TAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]