Cti-MIR169i

Basic info.

• miRNA locus ID
• Cti-MIR169i

• miRNA locus accession
• PmiREN003313

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01094534.1  7239  7370  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

              ACA  A   T   -    A    -     T    CGT       CAC    T     GA
      AGAAGAGT   CT GTT AGT AGCC AGGA TGACT GCCT   GTGAACA   CAAG TGTTG  
      ||||||||   || ||| ||| |||| |||| ||||| ||||   |||||||   |||| |||||  A
      TCTTCTCG   GA CAG TCA TCGG TCCT ACTGA CGGA   TACTTGT   GTTC ACGAT  
ACTCGT        ---  -   T   A    A    C     -    --T       TTT    C     GA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]