Cti-MIR169h

Basic info.

• miRNA locus ID
• Cti-MIR169h

• miRNA locus accession
• PmiREN003312

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01094534.1  5059  5187  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

        GA      CACTCT  TC G  G     -GA     T    --  TC    CT  A    A  GAA
          GAAGAG      TG  G TA CCAAG   TGACT GCCT  TA  CCAG  CA GGTG TA   
          ||||||      ||  | || |||||   ||||| ||||  ||  ||||  || |||| ||    
          CTTCTC      AC  C AT GGTTC   ACTGA CGGA  AT  GGTT  GT CCAC AT   
TACTCGGACA      ------  TT A  G     ATC     -    CT  TT    -T  A    A  AAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]