Cti-MIR169b

Basic info.

• miRNA locus ID
• Cti-MIR169b

• miRNA locus accession
• PmiREN003306

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01068728.1  2507  2634  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

        AC  C        CT G          -     T   AC   --    TT A     GTAGC
     AGA  AG AGTCTTTT  G TAGCCAAGGA TGACT GCC  ATC  CCAA  C AGGTG     
     |||  || ||||||||  | |||||||||| ||||| |||  |||  ||||  | |||||     A
     TCT  TC TCGGAAAG  C ATCGGTTCCT ACTGA CGG  TAG  GGTT  G TCCGC     
CTCTT   --  -        TT A          C     -   AC   TT    -T A     AACTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]