Cti-MIR169a

Basic info.

• miRNA locus ID
• Cti-MIR169a

• miRNA locus accession
• PmiREN003305

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01068728.1  2722  2853  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

             TGCT      T   -     A   -     T    CGTG      CAT    T     GA
      AGAAGAG    CTTGTT AGT AGCCA GGA TGACT GCCT    TGAACA   CAAG TGTTG  
      |||||||    |||||| ||| ||||| ||| ||||| ||||    ||||||   |||| |||||  A
      TCTTCTC    GGACAG TCA TCGGT CCT ACTGA CGGA    GCTTGT   GTTC ACGAT  
ACTCGT       ----      T   A     C   C     -    --TT      TTT    C     GA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]