Cti-MIR166e

Basic info.

• miRNA locus ID
• Cti-MIR166e

• miRNA locus accession
• PmiREN003296

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01301651.1  360  604  -

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

            TTTTT TT   A        TT      C    G C       AA  -     ACATACATATATATATATGTATGTATATATACCATCTTAGTCAACGGTAGAAAGGGATTCTTGA
      GAAGCC     C  TTG GGGGAATG  GTCTGG TCGA G CACTAGA  AA CCTAT                                                                
      ||||||     |  ||| ||||||||  |||||| |||| | |||||||  || |||||                                                                 
      CTTCGG     G  AAC CCCCTTAC  CGGACC GGCT C GTGGTCT  TA TTCTT                                                                
AGAAGG      ----C TT   C        TT      A    G T       --  G     ATTAAAGAGGTGCTTGGGTGGTTAGCTTAAGTTGGTTGTGGGTAGAATCAGTTGTTTTCCTGTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]