Cti-MIR166c

Basic info.

• miRNA locus ID
• Cti-MIR166c

• miRNA locus accession
• PmiREN003294

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01238108.1  596  716  +

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

  GAGATGATCATAT             TT      C  A           TCAA   AGAT
               GTTGAGGGGAATG  GTCTGG CC AGATCATTCGG    TCA    
               |||||||||||||  |||||| || |||||||||||    |||    T
               CAACTCCCCTTAC  CGGACC GG TTTAGTAAGTT    GGT    
GGGTTATCTTTTTCT             TT      A  C           --TG   ATAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]