Cti-MIR166b

Basic info.

• miRNA locus ID
• Cti-MIR166b

• miRNA locus accession
• PmiREN003293

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01141579.1  912  1035  +

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

    AG     T  T      T        TT G    C       AT        -TT     T
      ACAAG AG GGTTTG GAGGGATG  G CTGG TCGGTGC  TCACCCTT   TACGA 
      ||||| || |||||| ||||||||  | |||| |||||||  ||||||||   ||||| T
      TGTTT TC CCAAAC TTCCTTAC  C GACC GGCTACG  AGTGGGAA   ATGCT 
TACCAA     -  -      T        TT G    A       GT        CAT     T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]