Cti-MIR159

Basic info.

• miRNA locus ID
• Cti-MIR159

• miRNA locus accession
• PmiREN003282

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01179314.1  711  916  +

• Comments
• A member of family MIR159

• Confidence level
• 

Secondary strurture and sequence

G C     CC      ---A            GA       T        ---T   T   AA     T   G    C     G TT  T    T     - TTTAT
 G TGAAA  AGTGGA    GTAGAGCTCCTT  AGTCCAA AGAGGATC    GAG GGG  GATAG GCT CTGG TTATG A  CC CAAG CCTAT C     
 | |||||  ||||||    ||||||||||||  ||||||| ||||||||    ||| |||  ||||| ||| |||| ||||| |  || |||| ||||| |      
 C ATTTT  TTATCT    CATCTCGAGGGA  TTAGGTT TTTCCTAG    TTC TCC  TTATT CGA GACC AATAC T  GG GTTT GGATA G     
  T     TA      CCCA            AG       T        TATT   T   CA     T   G    T     G TC  T    C     T TTTGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]